Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925792.1_cds_XP_016474004.1_66079
CDS Infomation

[gene=LOC107795810] [db_xref=GeneID:107795810] [protein=proline--tRNA ligase, cytoplasmic-like isoform X4] [protein_id=XP_016474004.1] [location=join(18971..19060,19533..19720,19979..20066,21521..21643,21730..21882,21975..22259,22417..22635,23693..23786,23958..24022)] [gbkey=CDS]
Sequence

ATGAAGATAAAGAACTCCTACTTCCCTCTTTTTGTGTCCCCTGGTGTTCTACAAAAGGAA
AAGGACCACATAGAAGGATTTGCTCCTGAGGTTGCTTGGGTTACAAAATCTGGAGAATCT
GATCTGGAAGTCCCCATTGCGATTCGACCAACAAGTGAAACAGTGATGTATCCTTATTTC
TCTAAGTGGATAAGGGGACACCGTGACTTGCCCTTGAGACTTAACCAGTGGTGCAACGTT
GTGCGGTGGGAGTTTAGCAACCCAACCCCCTTCATCAGGAGCCGTGAGTTTCTTTGGCAA
GAAGGACACACTGCTTTTGCAACTAAGGAGGAGGCAGATGCAGATGTATTTCGGTTATAT
GTTACAGTTCTTGAAATCTTGGAGTTGTATAGACGTATATATGAAGACTTCTTAGCTGTT
CCAGTGAGTAAGGGAAAGAAAAGCGAGCTTGAGAAGTTTGCTGGTGGACTCTATACGACT
ACAGTAGAGGCTTTTATCCCTAATACTGGCCGTGGTATCCAAGGTGCGACTTCACATTGT
TTGGGCCAGAATTTTGCAACAATGTTTGAGATAAATTTTGAAAACGAGAAGGGAGAGAAG
GCTATGGTCTGGCAGAATTCCTGGGGCTTTACAACCAGAACGATTGGTGTGATGATCATG
GTTCATGGAGATGATAAAGGCCTGGTCTTACCTCCTAAAGTTGCAGCAACACAAGTAATT
GTTATTCCCGTGCTATACAAGGATGCTAATAATCAAGGGATCTTTGACGCCTGTGCTGCC
ACTGTCAAAAACTTGAACGAATCAGGTATTCGTGCTGAGGCAGATTACAGAGACAACTAC
TCACCTGGCTGGAAATATTCTCACTGGGAAATGAAGGGGGTTCCTCTTAGGATTGAAATA
GGACCAAAAGATCTTGCAAATAATCAGGTACGAGCTGTTCGACGTGACAATGGAGCCAAA
ACTGATATTACTGTGGCAAATTTAGTCGAACAAGTAAACGATGTGCTTGCCTCTATCCAA
CAAAATCTATTTGATGTCGCAAAACAAAAGCGGGATGCTTGTGTTCAGGTTGTAAAGACC
TGGGATGAATTTGCTGAAGCAGTAAGCCAAAAGAAATTGATCTTGGCTCCTTGGTGTGAT
GAGGAGGATGTCGAGAAAGATGTGAAGGCACGGACAAAAGGGGAAATGGGTGCAGCGAAG
ACTCTTTGTTCTCCATTTGACCAGCCTGAGCTGCCTGAAGGTACATTGTGCTTTGCCTCG
GGTAAACCTGCTAAGAAATGGACATACTGGGGCCGCAGCTATTGA

Peptide Sequence

PEP ID

XP_016474004.1
PEP Infomation

PREDICTED: proline--tRNA ligase, cytoplasmic-like isoform X4 [Nicotiana tabacum]
Sequence

MKIKNSYFPLFVSPGVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYF
SKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADADVFRLY
VTVLEILELYRRIYEDFLAVPVSKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHC
LGQNFATMFEINFENEKGEKAMVWQNSWGFTTRTIGVMIMVHGDDKGLVLPPKVAATQVI
VIPVLYKDANNQGIFDACAATVKNLNESGIRAEADYRDNYSPGWKYSHWEMKGVPLRIEI
GPKDLANNQVRAVRRDNGAKTDITVANLVEQVNDVLASIQQNLFDVAKQKRDACVQVVKT
WDEFAEAVSQKKLILAPWCDEEDVEKDVKARTKGEMGAAKTLCSPFDQPELPEGTLCFAS
GKPAKKWTYWGRSY

Transcript Sequence

Gene sequence data has not been registered.